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» Problems and results in extremal combinatorics - II
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WABI
2001
Springer
112views Bioinformatics» more  WABI 2001»
14 years 10 days ago
Finding an Optimal Inversion Median: Experimental Results
We derive a branch-and-bound algorithm to find an optimal inversion median of three signed permutations. The algorithm prunes to manageable size an extremely large search tree usi...
Adam C. Siepel, Bernard M. E. Moret
GECCO
2007
Springer
162views Optimization» more  GECCO 2007»
14 years 2 months ago
Some novel locality results for the blob code spanning tree representation
The Blob Code is a bijective tree code that represents each tree on n labelled vertices as a string of n − 2 vertex labels. In recent years, several researchers have deployed th...
Tim Paulden, David K. Smith
COMBINATORICS
2007
85views more  COMBINATORICS 2007»
13 years 8 months ago
Maximum Cardinality 1-Restricted Simple 2-Matchings
A simple 2-matching in a graph is a subgraph all of whose nodes have degree 1 or 2. A simple 2-matching is called k-restricted if every connected component has > k edges. We co...
David Hartvigsen
SODA
2010
ACM
216views Algorithms» more  SODA 2010»
14 years 5 months ago
On linear and semidefinite programming relaxations for hypergraph matching
The hypergraph matching problem is to find a largest collection of disjoint hyperedges in a hypergraph. This is a well-studied problem in combinatorial optimization and graph theo...
Yuk Hei Chan, Lap Chi Lau
CPM
1999
Springer
92views Combinatorics» more  CPM 1999»
14 years 6 days ago
Physical Mapping with Repeated Probes: The Hypergraph Superstring Problem
We focus on the combinatorial analysis of physical mapping with repeated probes. We present computational complexity results, and we describe and analyze an algorithmic strategy. W...
Serafim Batzoglou, Sorin Istrail