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BMCBI
2011
13 years 2 months ago
Bio: : Phylo - phyloinformatic analysis using Perl
Background: Phyloinformatic analyses involve large amounts of data and metadata of complex structure. Collecting, processing, analyzing, visualizing and summarizing these data and...
Rutger A. Vos, Jason Caravas, Klaas Hartmann, Mark...
BMCBI
2011
13 years 2 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
IANDC
2011
129views more  IANDC 2011»
13 years 2 months ago
Rigid tree automata and applications
We introduce the class of Rigid Tree Automata (RTA), an extension of standard bottom-up automata on ranked trees with distinguished states called rigid. Rigid states define a res...
Florent Jacquemard, Francis Klay, Camille Vacher
CORR
2010
Springer
127views Education» more  CORR 2010»
13 years 2 months ago
Complexity of Data Dependence problems for Program Schemas with Concurrency
am analysis and has been widely studied. In this paper we consider this problem at the abstraction level of program schemas in which computations occur in the Herbrand domain of te...
Sebastian Danicic, Robert M. Hierons, Michael R. L...
JBI
2011
233views Bioinformatics» more  JBI 2011»
13 years 2 months ago
A set of ontologies to drive tools for the control of vector-borne diseases
We are developing a set of ontologies that deal with vector-borne diseases and the arthropod vectors that transmit them. For practical reasons (application priorities), we initiat...
Pantelis Topalis, Emmanuel Dialynas, Elvira Mitrak...
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