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BMCBI
2011
12 years 11 months ago
Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence
Background: Alternative splicing of pre-mature RNA is an important process eukaryotes utilize to increase their repertoire of different protein products. Several types of differen...
Holger Pillmann, Klas Hatje, Florian Odronitz, Bjo...
CORR
2011
Springer
169views Education» more  CORR 2011»
12 years 11 months ago
Pseudo-random graphs and bit probe schemes with one-sided error
We study probabilistic bit-probe schemes for the membership problem. Given a set A of at most n elements from the universe of size m we organize such a structure that queries of t...
Andrei E. Romashchenko
JCC
2011
154views more  JCC 2011»
12 years 10 months ago
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...
JCC
2011
109views more  JCC 2011»
12 years 10 months ago
VoteDock: Consensus docking method for prediction of protein-ligand interactions
: Molecular recognition plays a fundamental role in all biological processes, and that is why great efforts have been made to understand and predict protein–ligand interactions. ...
Dariusz Plewczynski, Michal Lazniewski, Marcin von...
SIGMOD
2011
ACM
220views Database» more  SIGMOD 2011»
12 years 10 months ago
Zephyr: live migration in shared nothing databases for elastic cloud platforms
Multitenant data infrastructures for large cloud platforms hosting hundreds of thousands of applications face the challenge of serving applications characterized by small data foo...
Aaron J. Elmore, Sudipto Das, Divyakant Agrawal, A...