1272 search results - page 1 / 255 » Profile hidden Markov models |
STAIRS
2008
13 years 8 months ago
2008
This paper presents an extensive evaluation, on artificial datasets, of EDY, an unsupervised algorithm for automatically synthesizing a Structured Hidden Markov Model (S-HMM) from ...
AUSAI
2008
Springer
13 years 9 months ago
2008
Springer
Hidden Markov Models are a widely used generative model for analysing sequence data. A variant, Profile Hidden Markov Models are a special case used in Bioinformatics to represent,...
ICIP
2006
IEEE
14 years 8 months ago
2006
IEEE
In this paper we propose a new framework for modeling 2D shapes. A shape is first described by a sequence of local features (e.g., curvature) of the shape boundary. The resulting ...
BICOB
2009
Springer
13 years 11 months ago
2009
Springer
Protein-protein interaction plays critical roles in cellular functions. In this work, we propose a computational method to predict protein-protein interaction by using support vec...
BMCBI
2006
2006
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes
13 years 7 months ago
Background: Jumping alignments have recently been proposed as a strategy to search a given multiple sequence alignment A against a database. Instead of comparing a database sequen...