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BMCBI
2010
196views more  BMCBI 2010»
14 years 11 months ago
Content-based microarray search using differential expression profiles
Background: With the expansion of public repositories such as the Gene Expression Omnibus (GEO), we are rapidly cataloging cellular transcriptional responses to diverse experiment...
Jesse M. Engreitz, Alexander A. Morgan, Joel Dudle...
BMCBI
2011
14 years 9 months ago
iPhy: an integrated phylogenetic workbench for supermatrix analyses
Background: The increasing availability of molecular sequence data means that the accuracy of future phylogenetic studies is likely to by limited by systematic bias and taxon choi...
Martin O. Jones, Georgios D. Koutsovoulos, Mark L....
BMCBI
2011
14 years 9 months ago
Removing Noise From Pyrosequenced Amplicons
Background: In many environmental genomics applications a homologous region of DNA from a diverse sample is first amplified by PCR and then sequenced. The next generation sequenci...
Christopher Quince, Anders Lanzén, Russell ...
HICSS
2011
IEEE
157views Biometrics» more  HICSS 2011»
14 years 6 months ago
Reusing Relational Queries for Intuitive Decision Optimization
— Decision optimization is used in many applications such as those for finding the best course of action in emergencies. However, optimization solutions require considerable mat...
Alexander Brodsky, Nathan E. Egge, Xiaoyang Sean W...
ISPD
2012
ACM
288views Hardware» more  ISPD 2012»
13 years 10 months ago
Construction of realistic gate sizing benchmarks with known optimal solutions
Gate sizing in VLSI design is a widely-used method for power or area recovery subject to timing constraints. Several previous works have proposed gate sizing heuristics for power ...
Andrew B. Kahng, Seokhyeong Kang
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