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EACL
2003
ACL Anthology
13 years 11 months ago
Topological Parsing
We present a new grammar formalism for parsing with freer word-order languages, motivated by recent linguistic research in German and the Slavic languages. Unlike CFGs, these gram...
Gerald Penn, Mohammad Haji-Abdolhosseini
ISMB
1994
13 years 11 months ago
High Speed Pattern Matching in Genetic Data Base with Reconfigurable Hardware
Homologydetection in large data bases is probably the most time consuming operation in molecular genetic computing systems. Moreover, the progresses made all around the world conc...
Eric Lemoine, Joël Quinqueton, Jean Sallantin
BMCBI
2010
151views more  BMCBI 2010»
13 years 10 months ago
Misty Mountain clustering: application to fast unsupervised flow cytometry gating
Background: There are many important clustering questions in computational biology for which no satisfactory method exists. Automated clustering algorithms, when applied to large,...
István P. Sugár, Stuart C. Sealfon
BMCBI
2008
125views more  BMCBI 2008»
13 years 10 months ago
SNPLims: a data management system for genome wide association studies
Background: Recent progresses in genotyping technologies allow the generation high-density genetic maps using hundreds of thousands of genetic markers for each DNA sample. The ava...
Alessandro Orro, Guia Guffanti, Erika Salvi, Fabio...
BMCBI
2006
120views more  BMCBI 2006»
13 years 9 months ago
Integrating protein structures and precomputed genealogies in the Magnum database: Examples with cellular retinoid binding prote
Background: When accurate models for the divergent evolution of protein sequences are integrated with complementary biological information, such as folded protein structures, anal...
Michael E. Bradley, Steven A. Benner