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LREC
2008
90views Education» more  LREC 2008»
13 years 9 months ago
Navigating through Dense Annotation Spaces
Pattern matching, or querying, over annotations is a general purpose paradigm for inspecting, navigating, mining, and transforming annotation repositories--the common representati...
Branimir Boguraev, Mary S. Neff
FUN
2010
Springer
312views Algorithms» more  FUN 2010»
14 years 10 days ago
On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching
Given a string s, the Parikh vector of s, denoted p(s), counts the multiplicity of each character in s. Searching for a match of Parikh vector q (a “jumbled string”) in the tex...
Peter Burcsi, Ferdinando Cicalese, Gabriele Fici, ...
BMCBI
2006
109views more  BMCBI 2006»
13 years 7 months ago
An integrated system for genetic analysis
Background: Large-scale genetic mapping projects require data management systems that can handle complex phenotypes and detect and correct high-throughput genotyping errors, yet a...
Simon Fiddy, David Cattermole, Dong Xie, Xiao Yuan...
KDD
2006
ACM
115views Data Mining» more  KDD 2006»
14 years 8 months ago
Supervised probabilistic principal component analysis
Principal component analysis (PCA) has been extensively applied in data mining, pattern recognition and information retrieval for unsupervised dimensionality reduction. When label...
Shipeng Yu, Kai Yu, Volker Tresp, Hans-Peter Krieg...
BMCBI
2006
135views more  BMCBI 2006»
13 years 7 months ago
iHAP - integrated haplotype analysis pipeline for characterizing the haplotype structure of genes
Background: The advent of genotype data from large-scale efforts that catalog the genetic variants of different populations have given rise to new avenues for multifactorial disea...
Chun Meng Song, Boon Huat Yeo, Erwin Tantoso, Yuch...