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» Protein Model Representation and Construction
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BMCBI
2010
123views more  BMCBI 2010»
13 years 3 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke
FUZZIEEE
2007
IEEE
14 years 2 months ago
On Using Fuzzy Contact Maps for Protein Structure Comparison
The comparison of protein structures is an important problem in Bioinformatics, and Soft Computing techniques were recently introduced for achieving a better representation and po...
Juan Ramón González, David A. Pelta
MAGS
2007
168views more  MAGS 2007»
13 years 8 months ago
Agent-based protein structure prediction
A protein is identified by a finite sequence of amino acids, each of them chosen from a set of 20 elements. The Protein Structure Prediction Problem is the problem of predicting...
Luca Bortolussi, Agostino Dovier, Federico Fogolar...
ICHIM
2001
87views more  ICHIM 2001»
13 years 10 months ago
Digital Preservation of Cultural Heritage through Constructive Modeling
The issues of digital preservation of shapes and internal structures of historical and cultural objects are discussed. An overview of existing approaches to computer modeling of s...
Carl Vilbrandt, Alexander A. Pasko, Galina Pasko, ...
ISMB
1993
13 years 10 months ago
Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families
A Bayesian method for estimating the amino acid distributions in the states of a hidden Markov model (HMM) for a protein familyor the columns of a multiple alignment of that famil...
Michael Brown, Richard Hughey, Anders Krogh, I. Sa...