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» Protein Sequencing Experiment Planning Using Analogy
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AIIA
2005
Springer
14 years 1 months ago
BIOPACMAS: A Personalized, Adaptive, and Cooperative MultiAgent System for Predicting Protein Secondary Structure
In this paper, we illustrate an application aimed at predicting protein secondary structure. The proposed system has been devised using PACMAS, a generic architecture designed to s...
Giuliano Armano, Gianmaria Mancosu, Alessandro Orr...
SAC
2005
ACM
14 years 1 months ago
Comparing approaches to predict transmembrane domains in protein sequences
There are today several systems for predicting transmembrane domains in membrane protein sequences. As they are based on different classifiers as well as different pre- and post-p...
Paul Davidsson, Johan Hagelbäck, Kenny Svenss...
DCC
2007
IEEE
14 years 7 months ago
A Simple Statistical Algorithm for Biological Sequence Compression
This paper introduces a novel algorithm for biological sequence compression that makes use of both statistical properties and repetition within sequences. A panel of experts is ma...
Minh Duc Cao, Trevor I. Dix, Lloyd Allison, Chris ...
BMCBI
2008
114views more  BMCBI 2008»
13 years 7 months ago
Combining classifiers for improved classification of proteins from sequence or structure
Background: Predicting a protein's structural or functional class from its amino acid sequence or structure is a fundamental problem in computational biology. Recently, there...
Iain Melvin, Jason Weston, Christina S. Leslie, Wi...
CSB
2004
IEEE
177views Bioinformatics» more  CSB 2004»
13 years 11 months ago
High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment
One goal of the structural genomics initiative is the identification of new protein folds. Sequence-based structural homology prediction methods are an important means for priorit...
Christopher James Langmead, Bruce Randall Donald