50 search results - page 5 / 10 » Protein homology detection using string alignment kernels |
BMCBI
2005
13 years 7 months ago
2005
Background: Profile-profile methods have been used for some years now to detect and align homologous proteins. The best such methods use information from the background distributi...
BMCBI
2005
13 years 7 months ago
2005
Background: Protein sequence alignments have become indispensable for virtually any evolutionary, structural or functional study involving proteins. Modern sequence search and com...
NAR
2008
13 years 7 months ago
2008
Multiple sequence alignments are essential in computational sequence and structural analysis, with applications in homology detection, structure modeling, function prediction and ...
SAC
2006
ACM
14 years 1 months ago
2006
ACM
Phylogenetic profiles of proteins − strings of ones and zeros encoding respectively the presence and absence of proteins in a group of genomes − have recently been used to iden...
BIBM
2008
IEEE
13 years 9 months ago
2008
IEEE
Recent studies in protein sequence analysis have leveraged the power of unlabeled data. For example, the profile and mismatch neighborhood kernels have shown significant improveme...