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» Protein secondary structure prediction using neural networks
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BMCBI
2004
196views more  BMCBI 2004»
13 years 7 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
A neural strategy for the inference of SH3 domain-peptide interaction specificity
Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
Enrico Ferraro, Allegra Via, Gabriele Ausiello, Ma...
BMCBI
2010
227views more  BMCBI 2010»
13 years 8 months ago
Accurate and efficient gp120 V3 loop structure based models for the determination of HIV-1 co-receptor usage
Background: HIV-1 targets human cells expressing both the CD4 receptor, which binds the viral envelope glycoprotein gp120, as well as either the CCR5 (R5) or CXCR4 (X4) co-recepto...
Majid Masso, Iosif I. Vaisman
NIPS
1994
13 years 9 months ago
A Connectionist Technique for Accelerated Textual Input: Letting a Network Do the Typing
Each yearpeoplespendahugeamountoftimetyping. Thetextpeopletype typically contains a tremendousamount of redundancy due to predictable word usage patterns and the text's struc...
Dean Pomerleau
ICTAI
2007
IEEE
14 years 2 months ago
A Java-Based Distributed Genetic Algorithm Framework
Distributed Genetic Algorithm (DGA) is one of the most promising choices among the optimization methods. In this paper we describe DGAFrame, a flexible framework for evolutionary...
Gabi Escuela, Yudith Cardinale, Jorge Gonzá...