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» Protein structural similarity search by Ramachandran codes
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CIKM
2006
Springer
13 years 11 months ago
Structure-based querying of proteins using wavelets
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
Keith Marsolo, Srinivasan Parthasarathy, Kotagiri ...
PPSN
2004
Springer
14 years 28 days ago
On the Importance of Information Speed in Structured Populations
A radius–based separation of selection and recombination spheres in diffusion model EAs is introduced, enabling a new taxonomy, oriented towards information flow analysis. It a...
Mike Preuss, Christian Lasarczyk
BMCBI
2010
104views more  BMCBI 2010»
13 years 7 months ago
Analysis of protein-protein docking decoys using interaction fingerprints: application to the reconstruction of CaM-ligand compl
Background: Protein-protein docking for proteins with large conformational changes was analyzed by using interaction fingerprints, one of the scales for measuring similarities amo...
Nobuyuki Uchikoga, Takatsugu Hirokawa
CVPR
2010
IEEE
13 years 6 months ago
Transform Coding for Fast Approximate Nearest Neighbor Search in High Dimensions
We examine the problem of large scale nearest neighbor search in high dimensional spaces and propose a new approach based on the close relationship between nearest neighbor search...
Jonathan Brandt
BMCBI
2005
115views more  BMCBI 2005»
13 years 7 months ago
Statistical distributions of optimal global alignment scores of random protein sequences
Background: The inference of homology from statistically significant sequence similarity is a central issue in sequence alignments. So far the statistical distribution function un...
Hongxia Pang, Jiaowei Tang, Su-Shing Chen, Shiheng...