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HPDC
2010
IEEE
13 years 8 months ago
Data parallelism in bioinformatics workflows using Hydra
Large scale bioinformatics experiments are usually composed by a set of data flows generated by a chain of activities (programs or services) that may be modeled as scientific work...
Fábio Coutinho, Eduardo S. Ogasawara, Danie...
TASE
2010
IEEE
13 years 2 months ago
Clear and Precise Specification of Ecological Data Management Processes and Dataset Provenance
Abstract--With the availability of powerful computational and communication systems, scientists now readily access large, complicated derived datasets and build on those results to...
Leon J. Osterweil, Lori A. Clarke, Aaron M. Elliso...
CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Open Microscopy Environment
High-throughput scoring of image-based biological assays heavily depends on the extraction of quantitative numerical information from microscopy images. This paper describes how t...
Ilya G. Goldberg
HPDC
2010
IEEE
13 years 8 months ago
Efficient querying of distributed provenance stores
Current projects that automate the collection of provenance information use a centralized architecture for managing the resulting metadata - that is, provenance is gathered at rem...
Ashish Gehani, Minyoung Kim, Tanu Malik
INTERNET
2007
105views more  INTERNET 2007»
13 years 7 months ago
Workflow Planning on a Grid
evel of abstraction, we can represent a workflow as a directed graph with operators (or tasks) at the vertices (see Figure 1). Each operator takes inputs from data sources or from ...
Craig W. Thompson, Wing Ning Li, Zhichun Xiao