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BIBM
2009
IEEE
206views Bioinformatics» more  BIBM 2009»
14 years 2 months ago
Application of Kernel Functions for Accurate Similarity Search in Large Chemical Databases
Background: Similaritysearch in chemical structure databases is an important problem with many applications in chemical genomics, drug design, and efficient chemical probe screeni...
Xiaohong Wang, Jun Huan, Aaron M. Smalter, Gerald ...
BMCBI
2008
108views more  BMCBI 2008»
13 years 7 months ago
A nonparametric model for quality control of database search results in shotgun proteomics
Background: Analysis of complex samples with tandem mass spectrometry (MS/MS) has become routine in proteomic research. However, validation of database search results creates a bo...
Jiyang Zhang, Jianqi Li, Xin Liu, Hongwei Xie, Yun...
BMCBI
2006
116views more  BMCBI 2006»
13 years 7 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
EDBT
2010
ACM
177views Database» more  EDBT 2010»
13 years 9 months ago
PerK: personalized keyword search in relational databases through preferences
Keyword-based search in relational databases allows users to discover relevant information without knowing the database schema or using complicated queries. However, such searches...
Kostas Stefanidis, Marina Drosou, Evaggelia Pitour...
APWEB
2009
Springer
13 years 11 months ago
Effective Top-k Keyword Search in Relational Databases Considering Query Semantics
Keyword search in relational databases has recently emerged as a new research topic. As a search result is often assembled from multiple relational tables, existing IR-style rankin...
Yanwei Xu, Yoshiharu Ishikawa, Jihong Guan