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CIBCB
2007
IEEE
14 years 3 months ago
Modeling protein-DNA binding time in Stochastic Discrete Event Simulation of Biological Processes
Abstract— This paper presents a parametric model to estimate the DNA-protein binding time using the DNA and protein structures and details of the binding site. To understand the ...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...
FOCS
2007
IEEE
14 years 3 months ago
On the Hardness and Smoothed Complexity of Quasi-Concave Minimization
In this paper, we resolve the smoothed and approximative complexity of low-rank quasi-concave minimization, providing both upper and lower bounds. As an upper bound, we provide th...
Jonathan A. Kelner, Evdokia Nikolova
TPHOL
2007
IEEE
14 years 3 months ago
Using XCAP to Certify Realistic Systems Code: Machine Context Management
Formal, modular, and mechanized verification of realistic systems code is desirable but challenging. Verification of machine context management (a basis of multi-tasking) is one ...
Zhaozhong Ni, Dachuan Yu, Zhong Shao
APN
2007
Springer
14 years 2 months ago
ProM 4.0: Comprehensive Support for Real Process Analysis
This tool paper describes the functionality of ProM. Version 4.0 of ProM has been released at the end of 2006 and this version reflects recent achievements in process mining. Proc...
Wil M. P. van der Aalst, Boudewijn F. van Dongen, ...
ATAL
2007
Springer
14 years 2 months ago
Rumours and reputation: evaluating multi-dimensional trust within a decentralised reputation system
In this paper we develop a novel probabilistic model of computational trust that explicitly deals with correlated multi-dimensional contracts. Our starting point is to consider an...
Steven Reece, Alex Rogers, Stephen Roberts, Nichol...