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    BIOINFORMATICS
    2007
    42views more  BIOINFORMATICS 2007»
    Query-driven module discovery in microarray data
    13 years 11 months ago
    Query-driven module discovery in microarray data
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    Thomas Dhollander, Qizheng Sheng, Karen Lemmens, B...
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    DILS
    2008
    Springer
    179views Life Sciences» more  DILS 2008»
    Semi Supervised Spectral Clustering for Regulatory Module Discovery
    14 years 19 days ago
    Semi Supervised Spectral Clustering for Regulatory Module Discovery
    Download  www.doc.ic.ac.uk
    We propose a novel semi-supervised clustering method for the task of gene regulatory module discovery. The technique uses data on dna binding as prior knowledge to guide the proces...
    Alok Mishra, Duncan Gillies
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    BMCBI
    2007
    146views more  BMCBI 2007»
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    13 years 11 months ago
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    Download  www.biomedcentral.com
    Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
    Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
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    RECOMB
    2006
    Springer
    202views Computational Biology» more  RECOMB 2006»
    Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
    14 years 11 months ago
    Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
    Download  www.menem.com
    Abstract. Transcriptional interactions in a cell are modulated by a variety of mechanisms that prevent their representation as pure pairwise interactions between a transcription fa...
    Kai Wang, Ilya Nemenman, Nilanjana Banerjee, Adam ...
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    BMCBI
    2007
    227views more  BMCBI 2007»
    Growing functional modules from a seed protein via integration of protein interaction and gene expression data
    13 years 11 months ago
    Growing functional modules from a seed protein via integration of protein interaction and gene expression data
    Download  www.biomedcentral.com
    Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
    Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
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