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AICT
2006
IEEE
110views Communications» more  AICT 2006»
15 years 8 months ago
Design and Implementation of the NetTraveler Middleware System based on Web Services
We present NetTraveler a database middleware system for WANs that is designed to efficiently run queries over sites that are either mobile clients or enterprise servers. NetTravel...
Elliot A. Vargas-Figueroa, Manuel Rodriguez-Martin...
BMCBI
2008
86views more  BMCBI 2008»
15 years 4 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
BMCBI
2011
14 years 11 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
JPDC
2007
167views more  JPDC 2007»
15 years 4 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
BMCBI
2010
132views more  BMCBI 2010»
15 years 4 months ago
Data structures and compression algorithms for high-throughput sequencing technologies
Background: High-throughput sequencing (HTS) technologies play important roles in the life sciences by allowing the rapid parallel sequencing of very large numbers of relatively s...
Kenny Daily, Paul Rigor, Scott Christley, Xiaohui ...