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DLOG
2003
13 years 10 months ago
Wine Agent: Semantic Web Testbed Application
The Wine Agent is a demonstration system that uses an underlying domain ontology to provide suitable wines for a given meal. In doing so it serves as a testbed, not only for the l...
Eric I. Hsu, Deborah L. McGuinness
ICFP
2010
ACM
13 years 9 months ago
Distance makes the types grow stronger: a calculus for differential privacy
We want assurances that sensitive information will not be disclosed when aggregate data derived from a database is published. Differential privacy offers a strong statistical guar...
Jason Reed, Benjamin C. Pierce
BMCBI
2010
151views more  BMCBI 2010»
13 years 8 months ago
Using diffusion distances for flexible molecular shape comparison
Background: Many molecules are flexible and undergo significant shape deformation as part of their function, and yet most existing molecular shape comparison (MSC) methods treat t...
Yu-Shen Liu, Qi Li, Guo-Qin Zheng, Karthik Ramani,...
BMCBI
2010
122views more  BMCBI 2010»
13 years 8 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
BMCBI
2008
135views more  BMCBI 2008»
13 years 8 months ago
Ab-origin: an enhanced tool to identify the sourcing gene segments in germline for rearranged antibodies
Background: In the adaptive immune system, variable regions of immunoglobulin (IG) are encoded by random recombination of variable (V), diversity (D), and joining (J) gene segment...
Xiaojing Wang, Di Wu, SiYuan Zheng, Jing Sun, Lin ...