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» RNA Secondary Structure Prediction with Simple Pseudoknots
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NAR
2007
129views more  NAR 2007»
13 years 7 months ago
taveRNA: a web suite for RNA algorithms and applications
We present taveRNA, a web server package that hosts three RNA web services: alteRNA, inteRNA and pRuNA. alteRNA is a new alternative for RNA secondary structure prediction. It is ...
Cagri Aksay, Raheleh Salari, Emre Karakoç, ...
BMCBI
2008
145views more  BMCBI 2008»
13 years 7 months ago
Directed acyclic graph kernels for structural RNA analysis
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
Kengo Sato, Toutai Mituyama, Kiyoshi Asai, Yasubum...
BIOINFORMATICS
2004
45views more  BIOINFORMATICS 2004»
13 years 7 months ago
Prediction of locally stable RNA secondary structures for genome-wide surveys
Ivo L. Hofacker, Barbara Priwitzer, Peter F. Stadl...
RECOMB
1999
Springer
13 years 11 months ago
Internal loops in RNA secondary structure prediction
Rune B. Lyngsø, Michael Zuker, Christian N....