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BMCBI
2010
198views more  BMCBI 2010»
13 years 7 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
BMCBI
2008
201views more  BMCBI 2008»
13 years 7 months ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...
BMCBI
2006
163views more  BMCBI 2006»
13 years 7 months ago
Ensemble attribute profile clustering: discovering and characterizing groups of genes with similar patterns of biological featur
Background: Ensemble attribute profile clustering is a novel, text-based strategy for analyzing a userdefined list of genes and/or proteins. The strategy exploits annotation data ...
J. R. Semeiks, A. Rizki, Mina J. Bissell, I. Saira...
ECCC
2006
88views more  ECCC 2006»
13 years 7 months ago
Hardness of Directed Routing with Congestion
Given a graph G and a collection of source-sink pairs in G, what is the least integer c such that each source can be connected by a path to its sink, with at most c paths going th...
Julia Chuzhoy, Sanjeev Khanna
CORR
2007
Springer
126views Education» more  CORR 2007»
13 years 7 months ago
Optimal Throughput-Diversity-Delay Tradeoff in MIMO ARQ Block-Fading Channels
In this paper, we consider an automatic-repeat-request (ARQ) retransmission protocol signaling over a block-fading multiple-input, multiple-output (MIMO) channel. Unlike previous ...
Allen Chuang, Albert Guillen i Fabregas, Lars K. R...