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» Randomized Optimum Models for Structured Prediction
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BMCBI
2010
156views more  BMCBI 2010»
13 years 7 months ago
Mathematical model for empirically optimizing large scale production of soluble protein domains
Background: Efficient dissection of large proteins into their structural domains is critical for high throughput proteome analysis. So far, no study has focused on mathematically ...
Eisuke Chikayama, Atsushi Kurotani, Takanori Tanak...
IM
2008
13 years 7 months ago
Directed Random Dot Product Graphs
In this paper we consider three models for random graphs that utilize the inner product as their fundamental object. We analyze the behavior of these models with respect to cluster...
Stephen J. Young, Edward R. Scheinerman
AAECC
2007
Springer
111views Algorithms» more  AAECC 2007»
13 years 7 months ago
When cache blocking of sparse matrix vector multiply works and why
Abstract. We present new performance models and a new, more compact data structure for cache blocking when applied to the sparse matrixvector multiply (SpM×V) operation, y ← y +...
Rajesh Nishtala, Richard W. Vuduc, James Demmel, K...
PPL
2008
75views more  PPL 2008»
13 years 7 months ago
Modeling the Performance of Communication Schemes on Network Topologies
This paper investigates the influence of the interconnection network topology of a parallel system on the delivery time of an ensemble of messages, called the communication scheme...
Jan Lemeire, Erik F. Dirkx, Walter Colitti
CAD
2004
Springer
13 years 7 months ago
Computer modeling approach for microsphere-packed bone scaffold
A computer modeling approach for constructing a three-dimensional microsphere-packed bone graft structure is presented. The modeling approach consists of both geometric and CAD-ba...
Pallavi Lal, Wei Sun