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ISMB
2000
13 years 8 months ago
Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data
We have developed a set of methods and tools for automatic discovery of putative regulatory signals in genome sequences. The analysis pipeline consists of gene expression data clu...
Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Ro...
BMCBI
2006
152views more  BMCBI 2006»
13 years 7 months ago
A two-stage approach for improved prediction of residue contact maps
Background: Protein topology representations such as residue contact maps are an important intermediate step towards ab initio prediction of protein structure. Although improvemen...
Alessandro Vullo, Ian Walsh, Gianluca Pollastri
CSL
1995
Springer
13 years 11 months ago
Deduction by Combining Semantic Tableaux and Integer Programming
In this paper we propose to extend the current capabilities of automated reasoning systems by making use of techniques from integer programming. We describe the architecture of an ...
Bernhard Beckert, Reiner Hähnle
MICCAI
2009
Springer
14 years 8 months ago
Actin Filament Tracking Based on Particle Filters and Stretching Open Active Contour Models
We introduce a novel algorithm for actin filament tracking and elongation measurement. Particle Filters (PF) and Stretching Open Active Contours (SOAC) work cooperatively to simpli...
Hongsheng Li, Tian Shen, Dimitrios Vavylonis, X...
COCO
2010
Springer
148views Algorithms» more  COCO 2010»
13 years 11 months ago
Derandomizing from Random Strings
—In this paper we show that BPP is truth-table reducible to the set of Kolmogorov random strings RK . It was previously known that PSPACE, and hence BPP is Turingreducible to RK ...
Harry Buhrman, Lance Fortnow, Michal Koucký...