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BMCBI
2008
184views more  BMCBI 2008»
13 years 7 months ago
Integrating protein-protein interactions and text mining for protein function prediction
Background: Functional annotation of proteins remains a challenging task. Currently the scientific literature serves as the main source for yet uncurated functional annotations, b...
Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich...
ICSE
2008
IEEE-ACM
14 years 8 months ago
Predicting accurate and actionable static analysis warnings: an experimental approach
Static analysis tools report software defects that may or may not be detected by other verification methods. Two challenges complicating the adoption of these tools are spurious f...
Joseph R. Ruthruff, John Penix, J. David Morgentha...
SIGSOFT
2008
ACM
14 years 8 months ago
Can developer-module networks predict failures?
Software teams should follow a well defined goal and keep their work focused. Work fragmentation is bad for efficiency and quality. In this paper we empirically investigate the re...
Martin Pinzger, Nachiappan Nagappan, Brendan Murph...
ECBS
2006
IEEE
145views Hardware» more  ECBS 2006»
13 years 11 months ago
The Accuracy of Fault Prediction in Modified Code - Statistical Model vs. Expert Estimation
Fault prediction models still seem to be more popular in academia than in industry. In industry expert estimations of fault proneness are the most popular methods of deciding wher...
Piotr Tomaszewski, Jim Håkansson, Lars Lundb...
BIBE
2007
IEEE
138views Bioinformatics» more  BIBE 2007»
14 years 2 months ago
A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots
-We demonstrate a new algorithm named FlexStem to predict RNA secondary structures with pseudoknots. Our approach is based on the free energy minimization criterion, and utilizes a...
Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, We...