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    » Representation for Discovery of Protein Motifs
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    BMCBI
    2008
    172views more  BMCBI 2008»
    Compo: composite motif discovery using discrete models
    13 years 7 months ago
    Compo: composite motif discovery using discrete models
    Download  www.biomedcentral.com
    Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
    Geir Kjetil Sandve, Osman Abul, Finn Drablø...
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    TCBB
    2010
    98views more  TCBB 2010»
    VARUN: Discovering Extensible Motifs under Saturation Constraints
    13 years 2 months ago
    VARUN: Discovering Extensible Motifs under Saturation Constraints
    Download  www.dei.unipd.it
    Abstract-The discovery of motifs in biosequences is frequently torn between the rigidity of the model on the one hand and the abundance of candidates on the other. In particular, m...
    Alberto Apostolico, Matteo Comin, Laxmi Parida
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    SDM
    2009
    SIAM
    127views Data Mining» more  SDM 2009»
    Learning Random-Walk Kernels for Protein Remote Homology Identification and Motif Discovery.
    14 years 4 months ago
    Learning Random-Walk Kernels for Protein Remote Homology Identification and Motif Discovery.
    Download  www.cs.toronto.edu
    Anthony J. Bonner, Martin Renqiang Min, Rui Kuang,...
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    GECCO
    2006
    Springer
    159views Optimization» more  GECCO 2006»
    Identification of weak motifs in multiple biological sequences using genetic algorithm
    13 years 11 months ago
    Identification of weak motifs in multiple biological sequences using genetic algorithm
    Download  www.cs.york.ac.uk
    Recognition of motifs in multiple unaligned sequences provides an insight into protein structure and function. The task of discovering these motifs is very challenging because mos...
    Topon Kumar Paul, Hitoshi Iba
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    PSB
    2004
    91views Applied Computing» more  PSB 2004»
    Motif Discovery in Heterogeneous Sequence Data
    13 years 9 months ago
    Motif Discovery in Heterogeneous Sequence Data
    Download  www.cs.washington.edu
    This paper introduces the first integrated algorithm designed to discover novel motifs in heterogeneous sequence data, which is comprised of coregulated genes from a single genome...
    Amol Prakash, Mathieu Blanchette, Saurabh Sinha, M...
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