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CIBCB
2008
IEEE
15 years 10 months ago
Temporal and structural analysis of biological networks in combination with microarray data
— We introduce a graph-based relational learning approach using graph-rewriting rules for temporal and structural analysis of biological networks changing over time. The analysis...
Chang Hun You, Lawrence B. Holder, Diane J. Cook
SAC
2000
ACM
15 years 8 months ago
A Weighted Coding in a Genetic Algorithm for the Degree-Constrained Minimum Spanning Tree Problem
The coding by which chromosomes represent candidate solutions is a fundamental design choice in a genetic algorithm. This paper describes a novel coding of spanning trees in a gen...
Günther R. Raidl, Bryant A. Julstrom
SPE
2008
91views more  SPE 2008»
15 years 4 months ago
A multiple layer model to compare RNA secondary structures
composed of various graphs linked together by relations of abstraction/refinement. The new structure is useful for representing information that can be described at t levels of abs...
Julien Allali, Marie-France Sagot
KDD
2002
ACM
182views Data Mining» more  KDD 2002»
16 years 4 months ago
ANF: a fast and scalable tool for data mining in massive graphs
Graphs are an increasingly important data source, with such important graphs as the Internet and the Web. Other familiar graphs include CAD circuits, phone records, gene sequences...
Christopher R. Palmer, Phillip B. Gibbons, Christo...
WSDM
2009
ACM
187views Data Mining» more  WSDM 2009»
15 years 11 months ago
Speeding up algorithms on compressed web graphs
A variety of lossless compression schemes have been proposed to reduce the storage requirements of web graphs. One successful approach is virtual node compression [7], in which of...
Chinmay Karande, Kumar Chellapilla, Reid Andersen