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BMCBI
2005
106views more  BMCBI 2005»
13 years 9 months ago
Thesaurus-based disambiguation of gene symbols
Background: Massive text mining of the biological literature holds great promise of relating disparate information and discovering new knowledge. However, disambiguation of gene s...
Bob J. A. Schijvenaars, Barend Mons, Marc Weeber, ...
BMCBI
2005
97views more  BMCBI 2005»
13 years 9 months ago
Comparative mapping of sequence-based and structure-based protein domains
Background: Protein domains have long been an ill-defined concept in biology. They are generally described as autonomous folding units with evolutionary and functional independenc...
Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, S...
BMCBI
2005
151views more  BMCBI 2005»
13 years 9 months ago
ProMiner: rule-based protein and gene entity recognition
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
Daniel Hanisch, Katrin Fundel, Heinz-Theodor Mevis...
BMCBI
2005
117views more  BMCBI 2005»
13 years 9 months ago
An evaluation of GO annotation retrieval for BioCreAtIvE and GOA
Background: The Gene Ontology Annotation (GOA) database http://www.ebi.ac.uk/GOA aims to provide high-quality supplementary GO annotation to proteins in the UniProt Knowledgebase....
Evelyn Camon, Daniel Barrell, Emily Dimmer, Vivian...
TVCG
2008
122views more  TVCG 2008»
13 years 9 months ago
Interactive Entity Resolution in Relational Data: A Visual Analytic Tool and Its Evaluation
Databases often contain uncertain and imprecise references to real-world entities. Entity resolution, which is the process of reconciling multiple references to underlying real-wor...
Hyunmo Kang, Lise Getoor, Ben Shneiderman, Mustafa...