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BMCBI
2010
108views more  BMCBI 2010»
13 years 7 months ago
BIGSdb: Scalable analysis of bacterial genome variation at the population level
Background: The opportunities for bacterial population genomics that are being realised by the application of parallel nucleotide sequencing require novel bioinformatics platforms...
Keith A. Jolley, Martin C. J. Maiden
BMCBI
2010
108views more  BMCBI 2010»
13 years 7 months ago
Prediction of RNA secondary structure by maximizing pseudo-expected accuracy
Background: Recent studies have revealed the importance of considering the entire distribution of possible secondary structures in RNA secondary structure predictions; therefore, ...
Michiaki Hamada, Kengo Sato, Kiyoshi Asai
BMCBI
2010
201views more  BMCBI 2010»
13 years 7 months ago
IntelliGO: a new vector-based semantic similarity measure including annotation origin
Background: The Gene Ontology (GO) is a well known controlled vocabulary describing the biological process, molecular function and cellular component aspects of gene annotation. I...
Sidahmed Benabderrahmane, Malika Smaïl-Tabbon...
CONCURRENCY
2010
172views more  CONCURRENCY 2010»
13 years 7 months ago
Modeling of tsunami waves and atmospheric swirling flows with graphics processing unit (GPU) and radial basis functions (RBF)
The faster growth curves in the speed of GPUs relative to CPUs in the past decade and its rapidly gained popularity have spawned a new area of development in computational technol...
Jessica Schmidt, Cécile Piret, Nan Zhang, B...
CONSTRAINTS
2010
153views more  CONSTRAINTS 2010»
13 years 7 months ago
Philosophy of the MiniZinc challenge
MiniZinc arose as a response to the extended discussion at CP2006 of the need for a standard modelling language for CP. This is a challenging problem, and we believe MiniZinc makes...
Peter J. Stuckey, Ralph Becket, Julien Fischer
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