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» Retrieval of 3D protein structures
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ICCV
2009
IEEE
13 years 8 months ago
Unsupervised learning of high-order structural semantics from images
Structural semantics are fundamental to understanding both natural and man-made objects from languages to buildings. They are manifested as repeated structures or patterns and are...
Jizhou Gao, Yin Hu, Jinze Liu, Ruigang Yang
RECOMB
2005
Springer
14 years 11 months ago
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
Abstract. Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e. segmenta...
Yan Liu, Jaime G. Carbonell, Peter Weigele, Vanath...
BMCBI
2010
160views more  BMCBI 2010»
13 years 11 months ago
Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins
Background: Protein-protein interactions play a key role in biological processes of proteins within a cell. Recent high-throughput techniques have generated protein-protein intera...
Young-Rae Cho, Aidong Zhang
GCB
2006
Springer
99views Biometrics» more  GCB 2006»
14 years 2 months ago
Shape Distributions and Protein Similarity
: In this paper we describe a similarity model that provides the objective basis for clustering proteins of similar structure. More specifically, we consider the following variant ...
Stefan Canzar, Jan Remy
BIBE
2003
IEEE
124views Bioinformatics» more  BIBE 2003»
14 years 4 months ago
Prediction of Contact Maps Using Support Vector Machines
Contact map prediction is of great interest for its application in fold recognition and protein 3D structure determination. In this paper we present a contact-map prediction algor...
Ying Zhao, George Karypis