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BMCBI
2010
80views more  BMCBI 2010»
13 years 10 months ago
An ontology-based search engine for protein-protein interactions
Background: Keyword matching or ID matching is the most common searching method in a large database of protein-protein interactions. They are purely syntactic methods, and retriev...
Byungkyu Park, Kyungsook Han
TREC
2003
13 years 11 months ago
Improving the Robustness of Language Models - UIUC TREC 2003 Robust and Genomics Experiments
In this paper, we report our experiments in the TREC 2003 Genomics Track and the Robust Track. A common theme that we explored is the robustness of a basic language modeling retri...
ChengXiang Zhai, Tao Tao, Hui Fang, Zhidi Shang
GIS
2005
ACM
14 years 10 months ago
Close pair queries in moving object databases
Databases of moving objects are important for air traffic control, ground traffic, and battlefield configurations. We introduce the (historical and spatial) range close-pair query...
Panfeng Zhou, Donghui Zhang, Betty Salzberg, Gene ...
TREC
2007
13 years 11 months ago
Language Models for Genomics Information Retrieval: UIUC at TREC 2007 Genomics Track
The University of Illinois at Urbana-Champaign (UIUC) participated in TREC 2007 Genomics Track. Our general goal of participation is to apply language modelbased approaches to the...
Yue Lu, Jing Jiang, Xu Ling, Xin He, ChengXiang Zh...
BMCBI
2008
146views more  BMCBI 2008»
13 years 10 months ago
ProLoc-GO: Utilizing informative Gene Ontology terms for sequence-based prediction of protein subcellular localization
Background: Gene Ontology (GO) annotation, which describes the function of genes and gene products across species, has recently been used to predict protein subcellular and subnuc...
Wen-Lin Huang, Chun-Wei Tung, Shih-Wen Ho, Shiow-F...