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BMCBI
2008
122views more  BMCBI 2008»
15 years 4 months ago
High-throughput bioinformatics with the Cyrille2 pipeline system
Background: Modern omics research involves the application of high-throughput technologies that generate vast volumes of data. These data need to be pre-processed, analyzed and in...
Mark W. E. J. Fiers, Ate van der Burgt, Erwin Date...
DEBS
2009
ACM
15 years 7 months ago
Event-based systems: opportunities and challenges at exascale
Streaming data models have been shown to be useful in many applications requiring high-performance data exchange. Application-level overlay networks are a natural way to realize t...
Greg Eisenhauer, Matthew Wolf, Hasan Abbasi, Karst...
125
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IEEEPACT
1998
IEEE
15 years 8 months ago
Athapascan-1: On-Line Building Data Flow Graph in a Parallel Language
In order to achieve practical efficient execution on a parallel architecture, a knowledge of the data dependencies related to the application appears as the key point for building...
François Galilée, Jean-Louis Roch, G...
GECCO
2005
Springer
186views Optimization» more  GECCO 2005»
15 years 9 months ago
Subproblem optimization by gene correlation with singular value decomposition
Several ways of using singular value decomposition (SVD), a linear algebra technique typically used for information retrieval, to decompose problems into subproblems are investiga...
Jacob G. Martin
BMCBI
2010
202views more  BMCBI 2010»
15 years 4 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader