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BMCBI
2007
179views more  BMCBI 2007»
13 years 9 months ago
Automated smoother for the numerical decoupling of dynamics models
Background: Structure identification of dynamic models for complex biological systems is the cornerstone of their reverse engineering. Biochemical Systems Theory (BST) offers a pa...
Marco Vilela, Carlos Cristiano H. Borges, Susana V...
BMCBI
2008
226views more  BMCBI 2008»
13 years 9 months ago
ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining
Background: New systems biology studies require researchers to understand how interplay among myriads of biomolecular entities is orchestrated in order to achieve high-level cellu...
Tianxiao Huan, Andrey Y. Sivachenko, Scott H. Harr...
CORR
2008
Springer
133views Education» more  CORR 2008»
13 years 9 months ago
Emergence of Spontaneous Order Through Neighborhood Formation in Peer-to-Peer Recommender Systems
The advent of the Semantic Web necessitates paradigm shifts away from centralized client/server architectures towards decentralization and peer-to-peer computation, making the exi...
Ernesto Diaz-Aviles, Lars Schmidt-Thieme, Cai-Nico...
SIAMSC
2010
120views more  SIAMSC 2010»
13 years 8 months ago
Weighted Matrix Ordering and Parallel Banded Preconditioners for Iterative Linear System Solvers
The emergence of multicore architectures and highly scalable platforms motivates the development of novel algorithms and techniques that emphasize concurrency and are tolerant of ...
Murat Manguoglu, Mehmet Koyutürk, Ahmed H. Sa...
IDA
2009
Springer
13 years 7 months ago
Estimating Hidden Influences in Metabolic and Gene Regulatory Networks
We address the applicability of blind source separation (BSS) methods for the estimation of hidden influences in biological dynamic systems such as metabolic or gene regulatory net...
Florian Blöchl, Fabian J. Theis