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ISMB
1994
13 years 9 months ago
An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence
A new version of the GRAIL system (Uberbacher and Mural, 1991; Mural et al., 1992; Uberbacher et al., 1993), called GRAILII, has recently been developed (Xu et al., 1994). GRAILII...
Yin Xu, J. Ralph Einstein, Richard J. Mural, Manes...
HPDC
2010
IEEE
13 years 8 months ago
Data parallelism in bioinformatics workflows using Hydra
Large scale bioinformatics experiments are usually composed by a set of data flows generated by a chain of activities (programs or services) that may be modeled as scientific work...
Fábio Coutinho, Eduardo S. Ogasawara, Danie...
GECCO
2008
Springer
129views Optimization» more  GECCO 2008»
13 years 8 months ago
Fitness calculation approach for the switch-case construct in evolutionary testing
A well-designed fitness function is essential to the effectiveness and efficiency of evolutionary testing. Fitness function design has been researched extensively. For fitness ...
Yan Wang, Zhiwen Bai, Miao Zhang, Wen Du, Ying Qin...
SIGCOMM
2010
ACM
13 years 7 months ago
The case for active device drivers
We revisit the device-driver architecture supported by the majority of operating systems, where a driver is a passive object that does not have its own thread of control and is on...
Leonid Ryzhyk, Yanjin Zhu, Gernot Heiser
BMCBI
2010
136views more  BMCBI 2010»
13 years 7 months ago
SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale
Background: An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed...
Tamás Nepusz, Rajkumar Sasidharan, Alberto ...