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CPM
2006
Springer
125views Combinatorics» more  CPM 2006»
13 years 11 months ago
Geometric Suffix Tree: A New Index Structure for Protein 3-D Structures
Abstract. Protein structure analysis is one of the most important research issues in the post-genomic era, and faster and more accurate query data structures for such 3-D structure...
Tetsuo Shibuya
JCC
2011
154views more  JCC 2011»
12 years 10 months ago
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...
ISAAC
2003
Springer
115views Algorithms» more  ISAAC 2003»
14 years 27 days ago
A Faster Lattice Reduction Method Using Quantum Search
We propose a new lattice reduction method. Our algorithm approximates shortest lattice vectors up to a factor ≤ (k/6)n/2k and makes use of Grover’s quantum search algorithm. Th...
Christoph Ludwig
COMPGEOM
2001
ACM
13 years 11 months ago
Computing a 3-dimensional cell in an arrangement of quadrics: exactly and actually!
We present two approaches to the problem of calculating a cell in a 3-dimensional arrangement of quadrics. The first approach solves the problem using rational arithmetic. It work...
Nicola Geismann, Michael Hemmer, Elmar Schöme...
CORR
2010
Springer
174views Education» more  CORR 2010»
13 years 7 months ago
Gaussian Process Bandits for Tree Search
We motivate and analyse a new Tree Search algorithm, based on recent advances in the use of Gaussian Processes for bandit problems. We assume that the function to maximise on the ...
Louis Dorard, John Shawe-Taylor