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» SAT-based protein design
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KDD
2003
ACM
190views Data Mining» more  KDD 2003»
14 years 8 months ago
Distance-enhanced association rules for gene expression
We introduce a novel data mining technique for the analysis of gene expression. Gene expression is the effective production of the protein that a gene encodes. We focus on the cha...
Aleksandar Icev, Carolina Ruiz, Elizabeth F. Ryder
BMCBI
2008
128views more  BMCBI 2008»
13 years 7 months ago
Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...
Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
BMCBI
2004
93views more  BMCBI 2004»
13 years 7 months ago
Predicting binding sites of hydrolase-inhibitor complexes by combining several methods
Background: Protein-protein interactions play a critical role in protein function. Completion of many genomes is being followed rapidly by major efforts to identify interacting pr...
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...
EH
2005
IEEE
217views Hardware» more  EH 2005»
14 years 1 months ago
Space Bionanorobotic Systems: Design and Applications
This paper describes novel concepts of space bionanorobotic systems that are based on revolutionary bio-nano-mechanisms formed by protein and DNA based nano-components. Nano-robot...
Constantinos Mavroidis, Ajay Ummat
CDC
2009
IEEE
124views Control Systems» more  CDC 2009»
14 years 12 days ago
Design of insulating devices for in vitro synthetic circuits
— This paper describes a synthetic in vitro genetic circuit programmed to work as an insulating device. This circuit is composed of nucleic acids, which can be designed to intera...
Elisa Franco, Domitilla Del Vecchio, Richard M. Mu...