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JIB
2008
87views more  JIB 2008»
13 years 7 months ago
2.5D Visualisation of Overlapping Biological Networks
Biological data is often structured in the form of complex interconnected networks such as protein interaction and metabolic networks. In this paper, we investigate a new problem ...
David Cho Yau Fung, Seok-Hee Hong, Dirk Koschü...
NAR
2006
89views more  NAR 2006»
13 years 7 months ago
New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-Translate
The Onto-Tools suite is composed of an annotation database and eight complementary, web-accessible data mining tools: Onto-Express, Onto-Compare, Onto-Design, Onto-Translate, Onto...
Purvesh Khatri, Valmik Desai, Adi L. Tarca, Sivaku...
IJMMS
2007
142views more  IJMMS 2007»
13 years 7 months ago
Using OWL to model biological knowledge
Much has been written of the facilities for ontology building and reasoning offered for ontologies expressed in the Web Ontology Language (OWL). Less has been written about how th...
Robert Stevens, Mikel Egaña Aranguren, Katy...
TCBB
2008
103views more  TCBB 2008»
13 years 7 months ago
DNA Motif Representation with Nucleotide Dependency
The problem of discovering novel motifs of binding sites is important to the understanding of gene regulatory networks. Motifs are generally represented by matrices (PWM or PSSM) o...
Francis Y. L. Chin, Henry C. M. Leung
JCC
2007
127views more  JCC 2007»
13 years 7 months ago
Prediction of GFP spectral properties using artificial neural network
Abstract: In this study, we applied artificial neural network, implementing the backpropagation algorithm, for the prediction of the excitation and emission maxima of green fluores...
Chanin Nantasenamat, Chartchalerm Isarankura-Na-Ay...