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» SEQOPTICS: a protein sequence clustering system
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BMCBI
2008
200views more  BMCBI 2008»
13 years 8 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
BMCBI
2008
100views more  BMCBI 2008»
13 years 8 months ago
Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen p
Background: T-cell epitopes that promiscuously bind to multiple alleles of a human leukocyte antigen (HLA) supertype are prime targets for development of vaccines and immunotherap...
Guanglan Zhang, Asif M. Khan, Kellathur N. Sriniva...
SIGMOD
2010
ACM
321views Database» more  SIGMOD 2010»
14 years 1 months ago
HadoopDB in action: building real world applications
HadoopDB is a hybrid of MapReduce and DBMS technologies, designed to meet the growing demand of analyzing massive datasets on very large clusters of machines. Our previous work ha...
Azza Abouzied, Kamil Bajda-Pawlikowski, Jiewen Hua...
NAR
2002
138views more  NAR 2002»
13 years 8 months ago
The KEGG databases at GenomeNet
The Kyoto Encyclopedia of Genes and Genomes (KEGG) is the primary database resource of the Japanese GenomeNet service (http://www.genome.ad.jp/) for understanding higher order fun...
Minoru Kanehisa, Susumu Goto, Shuichi Kawashima, A...
BMCBI
2005
179views more  BMCBI 2005»
13 years 8 months ago
MARS: Microarray analysis, retrieval, and storage system
Background: Microarray analysis has become a widely used technique for the study of geneexpression patterns on a genomic scale. As more and more laboratories are adopting microarr...
Michael Maurer, Robert Molidor, Alexander Sturn, J...