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» SIMAGE: simulation of DNA-microarray gene expression data
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IJON
2008
128views more  IJON 2008»
13 years 7 months ago
Independent arrays or independent time courses for gene expression time series data analysis
In this paper we apply three different independent component analysis (ICA) methods, including spatial ICA (sICA), temporal ICA (tICA), and spatiotemporal ICA (stICA), to gene exp...
Sookjeong Kim, Jong Kyoung Kim, Seungjin Choi
BMCBI
2006
153views more  BMCBI 2006»
13 years 7 months ago
Cancer diagnosis marker extraction for soft tissue sarcomas based on gene expression profiling data by using projective adaptive
Background: Recent advances in genome technologies have provided an excellent opportunity to determine the complete biological characteristics of neoplastic tissues, resulting in ...
Hiro Takahashi, Takeshi Nemoto, Teruhiko Yoshida, ...
BMCBI
2010
196views more  BMCBI 2010»
13 years 5 months ago
Content-based microarray search using differential expression profiles
Background: With the expansion of public repositories such as the Gene Expression Omnibus (GEO), we are rapidly cataloging cellular transcriptional responses to diverse experiment...
Jesse M. Engreitz, Alexander A. Morgan, Joel Dudle...
CSB
2005
IEEE
205views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Fractal Clustering for Microarray Data Analysis
DNA microarray experiments generate a substantial amount of information about global gene expression. Gene expression profiles can be represented as points in multi-dimensional sp...
Lu-Yong Wang, Ammaiappan Balasubramanian, Amit Cha...
NIPS
2003
13 years 9 months ago
Fast Feature Selection from Microarray Expression Data via Multiplicative Large Margin Algorithms
New feature selection algorithms for linear threshold functions are described which combine backward elimination with an adaptive regularization method. This makes them particular...
Claudio Gentile