43 search results - page 6 / 9 » SIMAP - The similarity matrix of proteins |
BMCBI
2008
13 years 7 months ago
2008
Background: Multiple sequence alignments are a fundamental tool for the comparative analysis of proteins and nucleic acids. However, large data sets are no longer manageable for v...
GCB
2004
Springer
13 years 11 months ago
2004
Springer
: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs. In this paper, we present a new nonheuristic algorithm, ...
ICDM
2005
IEEE
14 years 29 days ago
2005
IEEE
The most suitable method for the automated classification of protein structures remains an open problem in computational biology. In order to classify a protein structure with an...
BMCBI
2008
13 years 7 months ago
2008
Background: Machine-learning tools have gained considerable attention during the last few years for analyzing biological networks for protein function prediction. Kernel methods a...
BMCBI
2006
13 years 7 months ago
2006
Background: A structure alignment method based on a local geometric property is presented and its performance is tested in pairwise and multiple structure alignments. In this appr...