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BMCBI
2011
13 years 1 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
CORR
2011
Springer
163views Education» more  CORR 2011»
13 years 1 months ago
Statistical Analysis of Link Scheduling on Long Paths
We study how the choice of packet scheduling algorithms influences end-to-end performance on long network paths. Taking a network calculus approach, we consider both deterministi...
Yashar Ghiassi-Farrokhfal, Jörg Liebeherr, Al...
HISB
2011
111views more  HISB 2011»
12 years 6 months ago
Spinal Cord Segmentation for Volume Estimation in Healthy and Multiple Sclerosis Subjects Using Crawlers and Minimal Paths
—Spinal cord analysis is an important problem in the study of various neurological diseases. Current segmentation and analysis methods in clinical use are slow and laborintensive...
Chris McIntosh, Ghassan Hamarneh, Matthew Toom, Ro...
JCNS
2010
103views more  JCNS 2010»
13 years 1 months ago
Efficient computation of the maximum a posteriori path and parameter estimation in integrate-and-fire and more general state-spa
A number of important data analysis problems in neuroscience can be solved using state-space models. In this article, we describe fast methods for computing the exact maximum a pos...
Shinsuke Koyama, Liam Paninski
ASPDAC
2006
ACM
123views Hardware» more  ASPDAC 2006»
13 years 10 months ago
Efficient static timing analysis using a unified framework for false paths and multi-cycle paths
- We propose a framework to unify the process of false paths and multi-cycle paths in static timing analysis (STA). We use subgraphs attached with timing constraints to represent f...
Shuo Zhou, Bo Yao, Hongyu Chen, Yi Zhu, Chung-Kuan...