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BMCBI
2006
88views more  BMCBI 2006»
13 years 8 months ago
RiboSubstrates: a web application addressing the cleavage specificities of ribozymes in designated genomes
Background: RNA-dependent gene silencing is becoming a routine tool used in laboratories worldwide. One of the important remaining hurdles in the selection of the target sequence,...
Jean-François Lucier, Lucien Junior Bergero...
BMCBI
2006
121views more  BMCBI 2006»
13 years 8 months ago
Splice site identification using probabilistic parameters and SVM classification
Background: Recent advances and automation in DNA sequencing technology has created a vast amount of DNA sequence data. This increasing growth of sequence data demands better and ...
A. K. M. A. Baten, Bill C. H. Chang, Saman K. Halg...
BMCBI
2010
124views more  BMCBI 2010»
13 years 8 months ago
Comparative analysis of acute and chronic corticosteroid pharmacogenomic effects in rat liver: Transcriptional dynamics and regu
Background: Comprehensively understanding corticosteroid pharmacogenomic effects is an essential step towards an insight into the underlying molecular mechanisms for both benefici...
Tung T. Nguyen, Richard R. Almon, Debra C. DuBois,...
BMCBI
2006
128views more  BMCBI 2006»
13 years 8 months ago
Comparative assessment of performance and genome dependence among phylogenetic profiling methods
Background: The rapidly increasing speed with which genome sequence data can be generated will be accompanied by an exponential increase in the number of sequenced eukaryotes. Wit...
Evan S. Snitkin, Adam M. Gustafson, Joseph C. Mell...
ICDE
2007
IEEE
121views Database» more  ICDE 2007»
14 years 18 days ago
Evaluating Different Ranking Functions for Context-Based Literature Search
Context-based literature digital library search is a new search paradigm that creates an effective ranking of query outputs by controlling query output topic diversity. We define ...
Nattakarn Ratprasartporn, Sulieman Bani-Ahmad, Ali...