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    BMCBI
    2010
    139views more  BMCBI 2010»
    RNAstructure: software for RNA secondary structure prediction and analysis
    13 years 8 months ago
    RNAstructure: software for RNA secondary structure prediction and analysis
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    Background: To understand an RNA sequence's mechanism of action, the structure must be known. Furthermore, target RNA structure is an important consideration in the design of...
    Jessica S. Reuter, David H. Mathews
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    BMCBI
    2010
    190views more  BMCBI 2010»
    APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
    13 years 8 months ago
    APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
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    Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
    Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
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    BIOCOMP
    2007
    90views Bioinformatics» more  BIOCOMP 2007»
    Prediction of trans-antisense Transcripts in Arabidopsis thaliana
    13 years 10 months ago
    Prediction of trans-antisense Transcripts in Arabidopsis thaliana
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    Background: Natural antisense transcripts (NATs) are coding or non-coding RNAs with sequence complementarity to other transcripts (sense transcripts). These RNAs could potentially...
    Huan Wang, Nam-Hai Chua, Xiu-Jie Wang
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    BMCBI
    2007
    114views more  BMCBI 2007»
    Mining and state-space modeling and verification of sub-networks from large-scale biomolecular networks
    13 years 8 months ago
    Mining and state-space modeling and verification of sub-networks from large-scale biomolecular networks
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    Background: Biomolecular networks dynamically respond to stimuli and implement cellular function. Understanding these dynamic changes is the key challenge for cell biologists. As ...
    Xiaohua Hu, Fang-Xiang Wu
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    PDPTA
    2004
    75views Distributed And Parallel Com...» more  PDPTA 2004»
    Static Performance Evaluation for Memory-Bound Computing: The MBRAM Model
    13 years 10 months ago
    Static Performance Evaluation for Memory-Bound Computing: The MBRAM Model
    Download  www.ccs.neu.edu
    We present the MBRAM model for static evaluation of the performance of memory-bound programs. The MBRAM model predicts the actual running time of a memory-bound program directly fr...
    Gene Cooperman, Xiaoqin Ma, Viet Ha Nguyen
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