Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
Christopher Moretti, Michael Olson, Scott J. Emric...
This paper describes our early experiences with a preproduction Cray XMT system that implements a scalable shared memory architecture with hardware support for multithreading. Unl...
We present a model for the parallel performance of algorithms that consist of concurrent, two-dimensional wavefronts implemented in a message passing environment. The model combine...
Adolfy Hoisie, Olaf M. Lubeck, Harvey J. Wasserman
Live peer-to-peer (P2P) streaming applications have been successfully deployed in the Internet. With relatively simple peer selection protocol design, modern live P2P streaming ap...
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...