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BMCBI
2005
246views more  BMCBI 2005»
13 years 7 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
GIS
2008
ACM
14 years 8 months ago
Parallel ODETLAP for terrain compression and reconstruction
We introduce a parallel approximation of an Over-determined Laplacian Partial Differential Equation solver (ODETLAP) applied to the compression and restoration of terrain data use...
Jared Stookey, Zhongyi Xie, Barbara Cutler, W. Ran...
CF
2009
ACM
14 years 2 months ago
Quantitative analysis of sequence alignment applications on multiprocessor architectures
The exponential growth of databases that contains biological information (such as protein and DNA data) demands great efforts to improve the performance of computational platforms...
Friman Sánchez, Alex Ramírez, Mateo ...
OSDI
1994
ACM
13 years 9 months ago
The Design and Evaluation of a Shared Object System for Distributed Memory Machines
This paper describes the design and evaluation of SAM, a shared object system for distributed memory machines. SAM is a portable run-time system that provides a global name space ...
Daniel J. Scales, Monica S. Lam
MAM
2002
151views more  MAM 2002»
13 years 7 months ago
A performance evaluation of cache injection in bus-based shared memory multiprocessors
Bus-based shared memory multiprocessors with private caches and snooping write-invalidate cache coherence protocols are dominant form of small- to medium-scale parallel machines t...
Aleksandar Milenkovic, Veljko M. Milutinovic