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BMCBI
2010
175views more  BMCBI 2010»
13 years 7 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
HPDC
2008
IEEE
14 years 1 months ago
Combining batch execution and leasing using virtual machines
As cluster computers are used for a wider range of applications, we encounter the need to deliver resources at particular times, to meet particular deadlines, and/or at the same t...
Borja Sotomayor, Kate Keahey, Ian T. Foster
CLUSTER
2007
IEEE
14 years 1 months ago
Balancing productivity and performance on the cell broadband engine
— The Cell Broadband Engine (BE) is a heterogeneous multicore processor, combining a general-purpose POWER architecture core with eight independent single-instructionmultiple-dat...
Sadaf R. Alam, Jeremy S. Meredith, Jeffrey S. Vett...
CCGRID
2010
IEEE
13 years 8 months ago
Designing Accelerator-Based Distributed Systems for High Performance
Abstract--Multi-core processors with accelerators are becoming commodity components for high-performance computing at scale. While accelerator-based processors have been studied in...
M. Mustafa Rafique, Ali Raza Butt, Dimitrios S. Ni...
HPCA
2009
IEEE
14 years 8 months ago
Design and implementation of software-managed caches for multicores with local memory
Heterogeneous multicores, such as Cell BE processors and GPGPUs, typically do not have caches for their accelerator cores because coherence traffic, cache misses, and latencies fr...
Sangmin Seo, Jaejin Lee, Zehra Sura