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ALMOB
2006
155views more  ALMOB 2006»
13 years 7 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg
BMCBI
2004
106views more  BMCBI 2004»
13 years 7 months ago
ESTIMA, a tool for EST management in a multi-project environment
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
Charu G. Kumar, Richard LeDuc, George Gong, Levan ...
ANCS
2009
ACM
13 years 5 months ago
Range Tries for scalable address lookup
In this paper we introduce the Range Trie, a new multiway tree data structure for address lookup. Each Range Trie node maps to an address range [Na, Nb) and performs multiple comp...
Ioannis Sourdis, Georgios Stefanakis, Ruben de Sme...
BMCBI
2011
13 years 2 months ago
Logical Development of the Cell Ontology
Background: The Cell Ontology (CL) is an ontology for the representation of in vivo cell types. As biological ontologies such as the CL grow in complexity, they become increasingl...
Terrence F. Meehan, Anna Maria Masci, Amina Abdull...
DGO
2003
128views Education» more  DGO 2003»
13 years 8 months ago
A Study on Automatic Ontology Mapping of Categorical Information
Semantic heterogeneity of information is a major barrier of information and system interoperability. Defining ontology of data and mapping ontologies among heterogeneous informati...
Naijun Zhou