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» Searching on the Secondary Structure of Protein Sequences
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JCB
2000
146views more  JCB 2000»
13 years 7 months ago
Bayesian Segmentation of Protein Secondary Structure
We present a novel method for predicting the secondary structure of a protein from its amino acid sequence. Most existing methods predict each position in turn based on a local wi...
Scott C. Schmidler, Jun S. Liu, Douglas L. Brutlag
IPPS
2007
IEEE
14 years 1 months ago
Protein Secondary Structure Prediction using Bayesian Inference method on Decision fusion algorithms
Prediction of protein secondary structure (alpha-helix, beta-sheet, coil) from primary sequence of amino acids is a very challenging task, and the problem has been approached from...
Somasheker Akkaladevi, Ajay K. Katangur
ISBRA
2007
Springer
14 years 1 months ago
Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice
Abstract. The lattice approach to biological structural analysis was made popular by the HP model for protein folding, but had not been used previously for RNA secondary structure ...
Minghui Jiang, Martin Mayne, Joel Gillespie
CEC
2005
IEEE
14 years 29 days ago
Evolving hidden Markov models for protein secondary structure prediction
New results are presented for the prediction of secondary structure information for protein sequences using Hidden Markov Models (HMMs) evolved using a Genetic Algorithm (GA). We a...
Kyoung-Jae Won, Thomas Hamelryck, Adam Prügel...
CSB
2003
IEEE
116views Bioinformatics» more  CSB 2003»
14 years 19 days ago
Towards Index-based Similarity Search for Protein Structure Databases
We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...
Orhan Çamoglu, Tamer Kahveci, Ambuj K. Sing...