146 search results - page 9 / 30 » Segment-Based Scores for Pairwise and Multiple Sequence Alig... |
PPSN
2004
Springer
14 years 1 months ago
2004
Springer
Abstract. The multiple sequence alignment problem (MSA) can be reformulated as the problem of finding a maximum weight trace in an alignment graph, which is derived from all pairw...
BIBM
2009
IEEE
14 years 2 months ago
2009
IEEE
—We present a new algorithm, ChemAlign, that uses physicochemical properties and secondary structure elements to create biologically relevant multiple sequence alignments (MSAs)....
GECCO
2003
Springer
14 years 26 days ago
2003
Springer
This article presents a model for DNA sequence alignment. In our model, a finite state automaton writes two-dimensional maps of nucleotide sequences. An evolutionary method for se...
TCBB
2008
13 years 7 months ago
2008
The subcellular locations of proteins are important functional annotations. An effective and reliable subcellular localization method is necessary for proteomics research. This pap...
RECOMB
2003
Springer
14 years 8 months ago
2003
Springer
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...