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    BMCBI
    2005
    114views more  BMCBI 2005»
    Extension of Lander-Waterman theory for sequencing filtered DNA libraries
    13 years 9 months ago
    Extension of Lander-Waterman theory for sequencing filtered DNA libraries
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    Background: The degree to which conventional DNA sequencing techniques will be successful for highly repetitive genomes is unclear. Investigators are therefore considering various...
    Michael C. Wendl, W. Bradley Barbazuk
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    JCB
    2007
    94views more  JCB 2007»
    Locality and Gaps in RNA Comparison
    13 years 9 months ago
    Locality and Gaps in RNA Comparison
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    Locality is an important and well-studied notion in comparative analysis of biological sequences. Similarly, taking into account affine gap penalties when calculating biological ...
    Rolf Backofen, Shihyen Chen, Danny Hermelin, Gad M...
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    BMCBI
    2005
    125views more  BMCBI 2005»
    Query3d: a new method for high-throughput analysis of functional residues in protein structures
    13 years 9 months ago
    Query3d: a new method for high-throughput analysis of functional residues in protein structures
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    Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
    Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
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    BMCBI
    2005
    96views more  BMCBI 2005»
    Overview of BioCreAtIvE task 1B: normalized gene lists
    13 years 9 months ago
    Overview of BioCreAtIvE task 1B: normalized gene lists
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    Background: Our goal in BioCreAtIve has been to assess the state of the art in text mining, with emphasis on applications that reflect real biological applications, e.g., the cura...
    Lynette Hirschman, Marc E. Colosimo, Alexander A. ...
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    BMCBI
    2005
    122views more  BMCBI 2005»
    A neural strategy for the inference of SH3 domain-peptide interaction specificity
    13 years 9 months ago
    A neural strategy for the inference of SH3 domain-peptide interaction specificity
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    Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
    Enrico Ferraro, Allegra Via, Gabriele Ausiello, Ma...
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