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COLT
2007
Springer
14 years 2 months ago
Resource-Bounded Information Gathering for Correlation Clustering
We present a new class of problems, called resource-bounded information gathering for correlation clustering. Our goal is to perform correlation clustering under circumstances in w...
Pallika Kanani, Andrew McCallum
BMCBI
2007
133views more  BMCBI 2007»
13 years 8 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
WEBI
2005
Springer
14 years 2 months ago
A Semi-Supervised Document Clustering Algorithm Based on EM
Document clustering is a very hard task in Automatic Text Processing since it requires to extract regular patterns from a document collection without a priori knowledge on the cat...
Leonardo Rigutini, Marco Maggini
BMCBI
2004
206views more  BMCBI 2004»
13 years 8 months ago
Combining gene expression data from different generations of oligonucleotide arrays
Background: One of the important challenges in microarray analysis is to take full advantage of previously accumulated data, both from one's own laboratory and from public re...
Kyu Baek Hwang, Sek Won Kong, Steven A. Greenberg,...
BMCBI
2006
157views more  BMCBI 2006»
13 years 8 months ago
Determination of the minimum number of microarray experiments for discovery of gene expression patterns
Background: One type of DNA microarray experiment is discovery of gene expression patterns for a cell line undergoing a biological process over a series of time points. Two import...
Fang-Xiang Wu, W. J. Zhang, Anthony J. Kusalik