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RECOMB
2002
Springer
14 years 7 months ago
Probabilistic hierarchical clustering for biological data
Biological data, such as gene expression profiles or protein sequences, is often organized in a hierarchy of classes, where the instances assigned to "nearby" classes in...
Eran Segal, Daphne Koller
BMCBI
2004
120views more  BMCBI 2004»
13 years 7 months ago
Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic information
Background: Expression microarrays are increasingly used to characterize environmental responses and hostparasite interactions for many different organisms. Probe selection for cD...
Yian A. Chen, David J. Mckillen, Shuyuan Wu, Matth...
SDM
2008
SIAM
136views Data Mining» more  SDM 2008»
13 years 9 months ago
Exploration and Reduction of the Feature Space by Hierarchical Clustering
In this paper we propose and test the use of hierarchical clustering for feature selection. The clustering method is Ward's with a distance measure based on GoodmanKruskal ta...
Dino Ienco, Rosa Meo
BMCBI
2006
161views more  BMCBI 2006»
13 years 7 months ago
A novel approach to phylogenetic tree construction using stochastic optimization and clustering
Background: The problem of inferring the evolutionary history and constructing the phylogenetic tree with high performance has become one of the major problems in computational bi...
Ling Qin, Yixin Chen, Yi Pan, Ling Chen
KDD
2002
ACM
170views Data Mining» more  KDD 2002»
14 years 8 months ago
Enhanced word clustering for hierarchical text classification
In this paper we propose a new information-theoretic divisive algorithm for word clustering applied to text classification. In previous work, such "distributional clustering&...
Inderjit S. Dhillon, Subramanyam Mallela, Rahul Ku...